3D structure

PDB id
9S7C (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of human mitochondrial COX1-translating ribosome nascent chain complex with tRNAs in initial hybrid state (H1)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.2 Å

Loop

Sequence
AAUGAUAUCAUCUCAACU
Length
18 nucleotides
Bulged bases
9S7C|1|A|U|3183, 9S7C|1|A|C|3189
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9S7C|1|A|A|3176
9S7C|1|A|A|3177
9S7C|1|A|U|3178
9S7C|1|A|G|3179
9S7C|1|A|A|3180
9S7C|1|A|U|3181
9S7C|1|A|A|3182
9S7C|1|A|U|3183
9S7C|1|A|C|3184
9S7C|1|A|A|3185
9S7C|1|A|U|3186
9S7C|1|A|C|3187
9S7C|1|A|U|3188
9S7C|1|A|C|3189
9S7C|1|A|A|3190
9S7C|1|A|A|3191
9S7C|1|A|C|3192
9S7C|1|A|U|3193

Current chains

Chain A
16S mitochondrial rRNA

Nearby chains

Chain 4
Large ribosomal subunit protein bL36m
Chain K
Large ribosomal subunit protein uL13m
Chain k
Large ribosomal subunit protein mL53
Chain r
Large ribosomal subunit protein mL66

Coloring options:

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