3D structure

PDB id
9S7C (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of human mitochondrial COX1-translating ribosome nascent chain complex with tRNAs in initial hybrid state (H1)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.2 Å

Loop

Sequence
UAAAUCAACAAA
Length
12 nucleotides
Bulged bases
9S7C|1|AA|A|471, 9S7C|1|AA|A|478
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9S7C|1|AA|U|468
9S7C|1|AA|A|469
9S7C|1|AA|A|470
9S7C|1|AA|A|471
9S7C|1|AA|U|472
9S7C|1|AA|C|473
9S7C|1|AA|A|474
9S7C|1|AA|A|475
9S7C|1|AA|C|476
9S7C|1|AA|A|477
9S7C|1|AA|A|478
9S7C|1|AA|A|479

Current chains

Chain AA
12S mitochondrial rRNA

Nearby chains

Chain A2
Small ribosomal subunit protein mS37
Chain AB
Small ribosomal subunit protein uS2m
Chain AD
Small ribosomal subunit protein uS5m
Chain AE
Small ribosomal subunit protein bS6m
Chain AS
Small ribosomal subunit protein mS23

Coloring options:

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