HL_9S7C_053

3D structure

PDB id

9S7C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human mitochondrial COX1-translating ribosome nascent chain complex with tRNAs in initial hybrid state (H1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UGAUGAA

Length

7 nucleotides

Bulged bases

9S7C|1|AA|A|636, 9S7C|1|AA|U|637

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9S7C_053 not in the Motif Atlas

Geometric match to HL_9AXU_017

Geometric discrepancy: 0.3712

The information below is about HL_9AXU_017

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_37569.4

Basepair signature

cWW-F-F-F

Number of instances in this motif group

10

Unit IDs

9S7C|1|AA|U|634
9S7C|1|AA|G|635
9S7C|1|AA|A|636
9S7C|1|AA|U|637
9S7C|1|AA|G|638
9S7C|1|AA|A|639
9S7C|1|AA|A|640

Current chains

Chain AA

12S mitochondrial rRNA

Nearby chains

Chain AB

Small ribosomal subunit protein uS2m

Chain AD

Small ribosomal subunit protein uS5m

Chain AE

Small ribosomal subunit protein bS6m

Chain AS

Small ribosomal subunit protein mS23