HL_9S7C_065

3D structure

PDB id

9S7C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human mitochondrial COX1-translating ribosome nascent chain complex with tRNAs in initial hybrid state (H1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GUUCAAUUC

Length

9 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9S7C_065 not in the Motif Atlas

Homologous match to HL_7E8O_003

Geometric discrepancy: 0.2446

The information below is about HL_7E8O_003

Detailed Annotation

T-loop with 2 stacked bulged bases

Broad Annotation

T-loop

Motif group

HL_33597.7

Basepair signature

cWW-tWH-F-F-F-F-F

Number of instances in this motif group

139

Unit IDs

9S7C|1|Ax|G|53
9S7C|1|Ax|U|54
9S7C|1|Ax|U|55
9S7C|1|Ax|C|56
9S7C|1|Ax|A|57
9S7C|1|Ax|A|58
9S7C|1|Ax|U|59
9S7C|1|Ax|U|60
9S7C|1|Ax|C|61

Current chains

Chain Ax

P/E-site tRNA (Visualisation example)

Nearby chains

Chain q

Large ribosomal subunit protein mL64