HL_9S7D_021
3D structure
- PDB id
- 9S7D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of human mitochondrial COX1-translating ribosome nascent chain-OXA1L/MITRAC complex in open state (open COX1-mtRNC-OXA1L/MITRAC)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- AGCAUCACCAGUAUU
- Length
- 15 nucleotides
- Bulged bases
- 9S7D|1|A|A|2521, 9S7D|1|A|U|2522, 9S7D|1|A|C|2523, 9S7D|1|A|A|2527, 9S7D|1|A|U|2531
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9S7D|1|A|A|2518
9S7D|1|A|G|2519
9S7D|1|A|C|2520
9S7D|1|A|A|2521
9S7D|1|A|U|2522
9S7D|1|A|C|2523
9S7D|1|A|A|2524
9S7D|1|A|C|2525
9S7D|1|A|C|2526
9S7D|1|A|A|2527
9S7D|1|A|G|2528
9S7D|1|A|U|2529
9S7D|1|A|A|2530
9S7D|1|A|U|2531
9S7D|1|A|U|2532
Current chains
- Chain A
- 16S mitochondrial rRNA
Nearby chains
- Chain 5
- Large ribosomal subunit protein mL37
- Chain AA
- Small subunit ribosomal RNA; SSU rRNA
- Chain D
- Large ribosomal subunit protein uL2m
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