HL_9S7E_008
3D structure
- PDB id
- 9S7E (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of human mitochondrial COX1-translating ribosome nascent chain-OXA1L/MITRAC complex in closed state (closed COX1-mtRNC-OXA1L/MITRAC)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UGUAGCAAAA
- Length
- 10 nucleotides
- Bulged bases
- 9S7E|1|A|A|1957, 9S7E|1|A|A|1961, 9S7E|1|A|A|1962
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9S7E_008 not in the Motif Atlas
- Homologous match to HL_7A0S_022
- Geometric discrepancy: 0.3995
- The information below is about HL_7A0S_022
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_50204.3
- Basepair signature
- cWW-cWS-tSW-F-F
- Number of instances in this motif group
- 12
Unit IDs
9S7E|1|A|U|1954
9S7E|1|A|G|1955
9S7E|1|A|U|1956
9S7E|1|A|A|1957
9S7E|1|A|G|1958
9S7E|1|A|C|1959
9S7E|1|A|A|1960
9S7E|1|A|A|1961
9S7E|1|A|A|1962
9S7E|1|A|A|1963
Current chains
- Chain A
- 16S mitochondrial rRNA
Nearby chains
- Chain 2
- Large ribosomal subunit protein bL34m
- Chain Av
- COX1 nascent chain
- Chain E
- Large ribosomal subunit protein uL3m
- Chain T
- Large ribosomal subunit protein uL22m
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