HL_9S7E_026

3D structure

PDB id

9S7E (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human mitochondrial COX1-translating ribosome nascent chain-OXA1L/MITRAC complex in closed state (closed COX1-mtRNC-OXA1L/MITRAC)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CCACAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9S7E_026 not in the Motif Atlas

Geometric match to HL_5U3G_002

Geometric discrepancy: 0.3011

The information below is about HL_5U3G_002

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.6

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

434

Unit IDs

9S7E|1|A|C|2771
9S7E|1|A|C|2772
9S7E|1|A|A|2773
9S7E|1|A|C|2774
9S7E|1|A|A|2775
9S7E|1|A|G|2776

Current chains

Chain A

16S mitochondrial rRNA

Nearby chains

Chain H

Large ribosomal subunit protein bL9m