HL_9S7E_036

3D structure

PDB id

9S7E (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human mitochondrial COX1-translating ribosome nascent chain-OXA1L/MITRAC complex in closed state (closed COX1-mtRNC-OXA1L/MITRAC)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UCACAA

Length

6 nucleotides

Bulged bases

9S7E|1|A|C|3157

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9S7E_036 not in the Motif Atlas

Geometric match to HL_5FMZ_001

Geometric discrepancy: 0.2005

The information below is about HL_5FMZ_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_21043.1

Basepair signature

cWW-cSW-F

Number of instances in this motif group

9

Unit IDs

9S7E|1|A|U|3154
9S7E|1|A|C|3155
9S7E|1|A|A|3156
9S7E|1|A|C|3157
9S7E|1|A|A|3158
9S7E|1|A|A|3159

Current chains

Chain A

16S mitochondrial rRNA

Nearby chains

Chain E

Large ribosomal subunit protein uL3m

Chain L

Large ribosomal subunit protein uL14m

Chain O

Large ribosomal subunit protein bL17m

Chain Q

Large ribosomal subunit protein bL19m