HL_9S7E_043

3D structure

PDB id

9S7E (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human mitochondrial COX1-translating ribosome nascent chain-OXA1L/MITRAC complex in closed state (closed COX1-mtRNC-OXA1L/MITRAC)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CCUAG

Length

5 nucleotides

Bulged bases

9S7E|1|AA|C|146, 9S7E|1|AA|A|148

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9S7E_043 not in the Motif Atlas

Geometric match to HL_6U8D_003

Geometric discrepancy: 0.1183

The information below is about HL_6U8D_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_01957.1

Basepair signature

cWW-F

Number of instances in this motif group

18

Unit IDs

9S7E|1|AA|C|145
9S7E|1|AA|C|146
9S7E|1|AA|U|147
9S7E|1|AA|A|148
9S7E|1|AA|G|149

Current chains

Chain AA

12S mitochondrial rRNA

Nearby chains

Chain AM

Small ribosomal subunit protein bS16m

Chain AT

Small ribosomal subunit protein mS25