HL_9S7E_047
3D structure
- PDB id
- 9S7E (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of human mitochondrial COX1-translating ribosome nascent chain-OXA1L/MITRAC complex in closed state (closed COX1-mtRNC-OXA1L/MITRAC)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UUGUAAAAAA
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9S7E_047 not in the Motif Atlas
- Geometric match to HL_8B0X_014
- Geometric discrepancy: 0.194
- The information below is about HL_8B0X_014
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_38491.4
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 14
Unit IDs
9S7E|1|AA|U|342
9S7E|1|AA|U|343
9S7E|1|AA|G|344
9S7E|1|AA|U|345
9S7E|1|AA|A|346
9S7E|1|AA|A|347
9S7E|1|AA|A|348
9S7E|1|AA|A|349
9S7E|1|AA|A|350
9S7E|1|AA|A|351
Current chains
- Chain AA
- 12S mitochondrial rRNA
Nearby chains
- Chain AF
- Small ribosomal subunit protein uS7m
- Chain AI
- Small ribosomal subunit protein uS11m
- Chain AQ
- Small ribosomal subunit protein bS21m
- Chain Az
- mRNA (Visualization example)
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