HL_9SPI_009

3D structure

PDB id

9SPI (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYO-EM STRUCTURE OF HUMAN 80S RIBOSOME WITH A/P/E-SITE TRNA AND MRNA CONTAINING URIDINE

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

CUUGGGAAUG

Length

10 nucleotides

Bulged bases

9SPI|1|L5|G|294, 9SPI|1|L5|A|295, 9SPI|1|L5|A|296

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9SPI|1|L5|C|289
9SPI|1|L5|U|290
9SPI|1|L5|U|291
9SPI|1|L5|G|292
9SPI|1|L5|G|293
9SPI|1|L5|G|294
9SPI|1|L5|A|295
9SPI|1|L5|A|296
9SPI|1|L5|U|297
9SPI|1|L5|G|298

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LL

Large ribosomal subunit protein eL13

Chain LN

60S ribosomal protein L15

Chain LQ

60S ribosomal protein L18

Chain La

Large ribosomal subunit protein uL15

Chain Lo

Large ribosomal subunit protein eL42