HL_9SRA_079

3D structure

PDB id

9SRA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of P. abyssi HibA:ribosome with an SD:antiSD duplex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

CACUGAGACACGGG

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9SRA|1|2|C|329
9SRA|1|2|A|330
9SRA|1|2|C|331
9SRA|1|2|U|332
9SRA|1|2|G|333
9SRA|1|2|A|334
9SRA|1|2|G|335
9SRA|1|2|A|336
9SRA|1|2|C|337
9SRA|1|2|A|338
9SRA|1|2|C|339
9SRA|1|2|G|340
9SRA|1|2|G|341
9SRA|1|2|G|342

Current chains

Chain 2

rRNA 16S

Nearby chains

Chain AE

30S ribosomal protein S4e

Chain AG

30S ribosomal protein S6e

Chain AJ

30S ribosomal protein S8e