HL_9SRB_062

3D structure

PDB id

9SRB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of P. abyssi 70S ribosome in complex with hibernation factor HibA and SBDS

Experimental method

ELECTRON MICROSCOPY

Resolution

2.3 Å

Loop

Sequence

UAACAGAGG

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9SRB|1|1|U|2587
9SRB|1|1|A|2588
9SRB|1|1|A|2589
9SRB|1|1|C|2590
9SRB|1|1|A|2591
9SRB|1|1|G|2592
9SRB|1|1|A|2593
9SRB|1|1|G|2594
9SRB|1|1|G|2595

Current chains

Chain 1

rRNA 23S

Nearby chains

Chain BL

Large ribosomal subunit protein uL15

Chain BR

Large ribosomal subunit protein eL21