HL_9SRC_086

3D structure

PDB id

9SRC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of P. abyssi 70S ribosome in complex with hibernation factor HibA in PTC conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.1 Å

Loop

Sequence

G(OMG)GUGAAAUC

Length

10 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: OMG

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9SRC|1|2|G|656
9SRC|1|2|OMG|657
9SRC|1|2|G|658
9SRC|1|2|U|659
9SRC|1|2|G|660
9SRC|1|2|A|661
9SRC|1|2|A|662
9SRC|1|2|A|663
9SRC|1|2|U|664
9SRC|1|2|C|665

Current chains

Chain 2

rRNA 16S

Nearby chains

Chain AH

30S ribosomal protein S7

Chain AM

30S ribosomal protein S11

Chain H

Dehydrogenase