HL_9SRC_088

3D structure

PDB id

9SRC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of P. abyssi 70S ribosome in complex with hibernation factor HibA in PTC conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.1 Å

Loop

Sequence

GAUUAGAUACC

Length

11 nucleotides

Bulged bases

9SRC|1|2|U|760

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9SRC|1|2|G|753
9SRC|1|2|A|754
9SRC|1|2|U|755
9SRC|1|2|U|756
9SRC|1|2|A|757
9SRC|1|2|G|758
9SRC|1|2|A|759
9SRC|1|2|U|760
9SRC|1|2|A|761
9SRC|1|2|C|762
9SRC|1|2|C|763

Current chains

Chain 2

rRNA 16S

Nearby chains

Chain 1

Large subunit ribosomal RNA; LSU rRNA

Chain AM

30S ribosomal protein S11

Chain H

Dehydrogenase