HL_9SRD_088

3D structure

PDB id

9SRD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of P. abyssi 70S ribosome in complex with hibernation factor HibA (HibA-uL5 conformation)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.1 Å

Loop

Sequence

GAUUAGAUACC

Length

11 nucleotides

Bulged bases

9SRD|1|2|U|760

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9SRD|1|2|G|753
9SRD|1|2|A|754
9SRD|1|2|U|755
9SRD|1|2|U|756
9SRD|1|2|A|757
9SRD|1|2|G|758
9SRD|1|2|A|759
9SRD|1|2|U|760
9SRD|1|2|A|761
9SRD|1|2|C|762
9SRD|1|2|C|763

Current chains

Chain 2

rRNA 16S

Nearby chains

Chain 1

Large subunit ribosomal RNA; LSU rRNA

Chain AM

30S ribosomal protein S11

Chain H

Dehydrogenase