HL_9SRD_092

3D structure

PDB id

9SRD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of P. abyssi 70S ribosome in complex with hibernation factor HibA (HibA-uL5 conformation)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.1 Å

Loop

Sequence

GAU(B8H)CAACGC

Length

10 nucleotides

Bulged bases

9SRD|1|2|G|943

QA status

Modified nucleotides: B8H

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9SRD|1|2|G|935
9SRD|1|2|A|936
9SRD|1|2|U|937
9SRD|1|2|B8H|938
9SRD|1|2|C|939
9SRD|1|2|A|940
9SRD|1|2|A|941
9SRD|1|2|C|942
9SRD|1|2|G|943
9SRD|1|2|C|944

Current chains

Chain 2

rRNA 16S

Nearby chains

Chain AK

30S ribosomal protein S9

Chain AL

30S ribosomal protein S10

Chain AO

30S ribosomal protein S13

Chain AP

30S ribosomal protein S14 type Z

Chain H

Dehydrogenase