HL_9SRD_099

3D structure

PDB id

9SRD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of P. abyssi 70S ribosome in complex with hibernation factor HibA (HibA-uL5 conformation)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.1 Å

Loop

Sequence

CUGCAACUCG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9SRD|1|2|C|1288
9SRD|1|2|U|1289
9SRD|1|2|G|1290
9SRD|1|2|C|1291
9SRD|1|2|A|1292
9SRD|1|2|A|1293
9SRD|1|2|C|1294
9SRD|1|2|U|1295
9SRD|1|2|C|1296
9SRD|1|2|G|1297

Current chains

Chain 2

rRNA 16S

Nearby chains

Chain AO

30S ribosomal protein S13

Chain AP

30S ribosomal protein S14 type Z

Chain AT

30S ribosomal protein S19