HL_9SRO_073

3D structure

PDB id

9SRO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of SKM-70S ribosomal stalled complex in the rotated state with hybrid tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

CCUCGCG

Length

7 nucleotides

Bulged bases

9SRO|1|a|U|1729, 9SRO|1|a|C|1732

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9SRO_073 not in the Motif Atlas

Geometric match to HL_4WSB_001

Geometric discrepancy: 0.289

The information below is about HL_4WSB_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91813.1

Basepair signature

cWW-cSW-F

Number of instances in this motif group

24

Unit IDs

9SRO|1|a|C|1727
9SRO|1|a|C|1728
9SRO|1|a|U|1729
9SRO|1|a|C|1730
9SRO|1|a|G|1731
9SRO|1|a|C|1732
9SRO|1|a|G|1733

Current chains

Chain a

23S rRNA

Nearby chains