HL_9SRO_078

3D structure

PDB id

9SRO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of SKM-70S ribosomal stalled complex in the rotated state with hybrid tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

CCG(PSU)AAC(3TD)A(PSU)AACGG

Length

15 nucleotides

Bulged bases

9SRO|1|a|A|1913

QA status

Modified nucleotides: PSU, 3TD

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9SRO|1|a|C|1908
9SRO|1|a|C|1909
9SRO|1|a|G|1910
9SRO|1|a|PSU|1911
9SRO|1|a|A|1912
9SRO|1|a|A|1913
9SRO|1|a|C|1914
9SRO|1|a|3TD|1915
9SRO|1|a|A|1916
9SRO|1|a|PSU|1917
9SRO|1|a|A|1918
9SRO|1|a|A|1919
9SRO|1|a|C|1920
9SRO|1|a|G|1921
9SRO|1|a|G|1922

Current chains

Chain a

23S rRNA

Nearby chains

Chain A

Small subunit ribosomal RNA; SSU rRNA

Chain Y

Transfer RNA; tRNA