HL_9SS0_018

3D structure

PDB id

9SS0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

30S ribosomal subunit RimM-KO with IF1 and IF3 (State I)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CCUUGAG

Length

7 nucleotides

Bulged bases

9SS0|1|D1|C|841, 9SS0|1|D1|U|842, 9SS0|1|D1|U|843, 9SS0|1|D1|G|844, 9SS0|1|D1|A|845

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9SS0|1|D1|C|840
9SS0|1|D1|C|841
9SS0|1|D1|U|842
9SS0|1|D1|U|843
9SS0|1|D1|G|844
9SS0|1|D1|A|845
9SS0|1|D1|G|846

Current chains

Chain D1

16S Ribosomal RNA

Nearby chains

Chain AQ

Small ribosomal subunit protein bS18