HL_9SS6_006
3D structure
- PDB id
- 9SS6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome from RimM-KO
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- GGUAACGGC
- Length
- 9 nucleotides
- Bulged bases
- 9SS6|1|D1|G|266
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9SS6_006 not in the Motif Atlas
- Homologous match to HL_6CZR_077
- Geometric discrepancy: 0.2673
- The information below is about HL_6CZR_077
- Detailed Annotation
- GNRA related
- Broad Annotation
- GNRA related
- Motif group
- HL_84299.3
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 9
Unit IDs
9SS6|1|D1|G|259
9SS6|1|D1|G|260
9SS6|1|D1|U|261
9SS6|1|D1|A|262
9SS6|1|D1|A|263
9SS6|1|D1|C|264
9SS6|1|D1|G|265
9SS6|1|D1|G|266
9SS6|1|D1|C|267
Current chains
- Chain D1
- 16S Ribosomal RNA
Nearby chains
- Chain AP
- Small ribosomal subunit protein uS17
- Chain AS
- Small ribosomal subunit protein bS20
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