HL_9SS6_059

3D structure

PDB id

9SS6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome from RimM-KO

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

CUUAGAAGCAG

Length

11 nucleotides

Bulged bases

9SS6|1|D2|U|1066, 9SS6|1|D2|A|1070

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9SS6|1|D2|C|1064
9SS6|1|D2|U|1065
9SS6|1|D2|U|1066
9SS6|1|D2|A|1067
9SS6|1|D2|G|1068
9SS6|1|D2|A|1069
9SS6|1|D2|A|1070
9SS6|1|D2|G|1071
9SS6|1|D2|C|1072
9SS6|1|D2|A|1073
9SS6|1|D2|G|1074

Current chains

Chain D2

23S Ribosomal RNA

Nearby chains

Chain BK

50S ribosomal protein L11