HL_9SYH_018
3D structure
- PDB id
- 9SYH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome from deltaRlmE strain
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.89 Å
Loop
- Sequence
- CUAACG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9SYH_018 not in the Motif Atlas
- Homologous match to HL_6CZR_090
- Geometric discrepancy: 0.1974
- The information below is about HL_6CZR_090
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_37824.6
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 360
Unit IDs
9SYH|1|A|C|862
9SYH|1|A|U|863
9SYH|1|A|A|864
9SYH|1|A|A|865
9SYH|1|A|C|866
9SYH|1|A|G|867
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain E
- Small ribosomal subunit protein uS5
Coloring options: