HL_9T0Y_012

3D structure

PDB id

9T0Y (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome from delta-9 strain

Experimental method

ELECTRON MICROSCOPY

Resolution

1.87 Å

Loop

Sequence

GUUAAUACC

Length

9 nucleotides

Bulged bases

9T0Y|1|A|U|467

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9T0Y_012 not in the Motif Atlas

Geometric match to HL_8B0X_011

Geometric discrepancy: 0.2661

The information below is about HL_8B0X_011

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_98423.4

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

16

Unit IDs

9T0Y|1|A|G|462
9T0Y|1|A|U|463
9T0Y|1|A|U|464
9T0Y|1|A|A|465
9T0Y|1|A|A|466
9T0Y|1|A|U|467
9T0Y|1|A|A|468
9T0Y|1|A|C|469
9T0Y|1|A|C|470

Current chains

Chain A

16S rRNA

Nearby chains