HL_9T0Y_029

3D structure

PDB id

9T0Y (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome from delta-9 strain

Experimental method

ELECTRON MICROSCOPY

Resolution

1.87 Å

Loop

Sequence

GAUCAGAAUGC

Length

11 nucleotides

Bulged bases

9T0Y|1|A|U|1364

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9T0Y|1|A|G|1356
9T0Y|1|A|A|1357
9T0Y|1|A|U|1358
9T0Y|1|A|C|1359
9T0Y|1|A|A|1360
9T0Y|1|A|G|1361
9T0Y|1|A|A|1362
9T0Y|1|A|A|1363
9T0Y|1|A|U|1364
9T0Y|1|A|G|1365
9T0Y|1|A|C|1366

Current chains

Chain A

16S rRNA

Nearby chains

Chain C

Small ribosomal subunit protein uS3

Chain I

Small ribosomal subunit protein uS9

Chain J

Small ribosomal subunit protein uS10

Chain N

Small ribosomal subunit protein uS14