HL_9T1C_009

3D structure

PDB id

9T1C (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome from delta-RlmE strain, PTC class 3

Experimental method

ELECTRON MICROSCOPY

Resolution

3.07 Å

Loop

Sequence

GUG(6MZ)AGAUGC

Length

10 nucleotides

Bulged bases

9T1C|1|a|6MZ|2030, 9T1C|1|a|A|2031, 9T1C|1|a|G|2032

QA status

Modified nucleotides: 6MZ

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9T1C|1|a|G|2027
9T1C|1|a|U|2028
9T1C|1|a|G|2029
9T1C|1|a|6MZ|2030
9T1C|1|a|A|2031
9T1C|1|a|G|2032
9T1C|1|a|A|2033
9T1C|1|a|U|2034
9T1C|1|a|G|2035
9T1C|1|a|C|2036

Current chains

Chain a

23S rRNA

Nearby chains

Chain d

Large ribosomal subunit protein uL3

Chain q

Large ribosomal subunit protein bL21

Chain z

Large ribosomal subunit protein bL32