HL_9T5X_045

3D structure

PDB id

9T5X (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a stalled E. coli 70S RNC-NuoK-70 in complex with the membrane protein insertase SecYEG-YidC

Experimental method

ELECTRON MICROSCOPY

Resolution

2.85 Å

Loop

Sequence

GAUAC

Length

5 nucleotides

Bulged bases

9T5X|1|a|U|321, 9T5X|1|a|A|322

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9T5X_045 not in the Motif Atlas

Geometric match to HL_8GLP_006

Geometric discrepancy: 0.056

The information below is about HL_8GLP_006

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.10

Basepair signature

cWW-F

Number of instances in this motif group

24

Unit IDs

9T5X|1|a|G|319
9T5X|1|a|A|320
9T5X|1|a|U|321
9T5X|1|a|A|322
9T5X|1|a|C|323

Current chains

Chain a

23S rRNA

Nearby chains

Chain e

Large ribosomal subunit protein uL4