HL_9T7H_052
3D structure
- PDB id
- 9T7H (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of P. abyssi 70S ribosome in complex with hibernation factor HibA (L1 stalk conformation)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.1 Å
Loop
- Sequence
- GGUACAAC
- Length
- 8 nucleotides
- Bulged bases
- 9T7H|1|1|A|2119
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9T7H_052 not in the Motif Atlas
- Homologous match to HL_4V9F_049
- Geometric discrepancy: 0.1405
- The information below is about HL_4V9F_049
- Detailed Annotation
- GNRA related
- Broad Annotation
- GNRA related
- Motif group
- HL_28253.1
- Basepair signature
- cWW-cWW-F-F-F
- Number of instances in this motif group
- 14
Unit IDs
9T7H|1|1|G|2116
9T7H|1|1|G|2117
9T7H|1|1|U|2118
9T7H|1|1|A|2119
9T7H|1|1|C|2120
9T7H|1|1|A|2121
9T7H|1|1|A|2122
9T7H|1|1|C|2123
Current chains
- Chain 1
- rRNA 23S
Nearby chains
- Chain BA
- Large ribosomal subunit protein uL1
- Chain Bj
- Large ribosomal subunit protein eL42
Coloring options: