HL_9T8K_001

3D structure

PDB id

9T8K (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome from delta-10 strain, PTC class 0

Experimental method

ELECTRON MICROSCOPY

Resolution

2.18 Å

Loop

Sequence

UUUUGUAUAA

Length

10 nucleotides

Bulged bases

9T8K|1|a|A|574

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9T8K|1|a|U|566
9T8K|1|a|U|567
9T8K|1|a|U|568
9T8K|1|a|U|569
9T8K|1|a|G|570
9T8K|1|a|U|571
9T8K|1|a|A|572
9T8K|1|a|U|573
9T8K|1|a|A|574
9T8K|1|a|A|575

Current chains

Chain a

23S rRNA

Nearby chains

Chain d

Large ribosomal subunit protein uL3

Chain k

Large ribosomal subunit protein uL15

Chain q

Large ribosomal subunit protein bL21

Chain z

Large ribosomal subunit protein bL32