HL_9TEW_056

3D structure

PDB id

9TEW (explore in PDB, NAKB, or RNA 3D Hub)

Description

DalDro bound to the initiating Escherichia coli 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

UGAAAGG

Length

7 nucleotides

Bulged bases

9TEW|1|a|A|781, 9TEW|1|a|G|784

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9TEW_056 not in the Motif Atlas

Geometric match to HL_8B0X_054

Geometric discrepancy: 0.0405

The information below is about HL_8B0X_054

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_79773.1

Basepair signature

cWW-tSW-F

Number of instances in this motif group

8

Unit IDs

9TEW|1|a|U|779
9TEW|1|a|G|780
9TEW|1|a|A|781
9TEW|1|a|A|782
9TEW|1|a|A|783
9TEW|1|a|G|784
9TEW|1|a|G|785

Current chains

Chain a

23S rRNA

Nearby chains

Chain 8

DalDro

Chain c

Large ribosomal subunit protein uL2