HL_9TEX_081

3D structure

PDB id

9TEX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Dal2 bound to the Escherichia coli 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.54 Å

Loop

Sequence

GUAAUCC

Length

7 nucleotides

Bulged bases

9TEX|1|a|A|2211, 9TEX|1|a|U|2213

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9TEX_081 not in the Motif Atlas

Geometric match to HL_8B0X_079

Geometric discrepancy: 0.0698

The information below is about HL_8B0X_079

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_33632.1

Basepair signature

cWW-F-F-F

Number of instances in this motif group

2

Unit IDs

9TEX|1|a|G|2209
9TEX|1|a|U|2210
9TEX|1|a|A|2211
9TEX|1|a|A|2212
9TEX|1|a|U|2213
9TEX|1|a|C|2214
9TEX|1|a|C|2215

Current chains

Chain a

23S rRNA

Nearby chains

Chain c

Large ribosomal subunit protein uL2