HL_9TEZ_019

3D structure

PDB id

9TEZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

DalDroS bound to the Escherichia coli 50S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

2.88 Å

Loop

Sequence

GGAAAC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9TEZ_019 not in the Motif Atlas

Homologous match to HL_7A0S_020

Geometric discrepancy: 0.1314

The information below is about HL_7A0S_020

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.5

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

428

Unit IDs

9TEZ|1|V|G|629
9TEZ|1|V|G|630
9TEZ|1|V|A|631
9TEZ|1|V|A|632
9TEZ|1|V|A|633
9TEZ|1|V|C|634

Current chains

Chain V

23S rRNA

Nearby chains

Chain 2

Large ribosomal subunit protein bL35

Chain k

50S ribosomal protein L15