HL_9TEZ_023

3D structure

PDB id

9TEZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

DalDroS bound to the Escherichia coli 50S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

2.88 Å

Loop

Sequence

UGAAAGG

Length

7 nucleotides

Bulged bases

9TEZ|1|V|A|781, 9TEZ|1|V|G|784

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9TEZ_023 not in the Motif Atlas

Geometric match to HL_8B0X_054

Geometric discrepancy: 0.0551

The information below is about HL_8B0X_054

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_79773.1

Basepair signature

cWW-tSW-F

Number of instances in this motif group

8

Unit IDs

9TEZ|1|V|U|779
9TEZ|1|V|G|780
9TEZ|1|V|A|781
9TEZ|1|V|A|782
9TEZ|1|V|A|783
9TEZ|1|V|G|784
9TEZ|1|V|G|785

Current chains

Chain V

23S rRNA

Nearby chains

Chain c

Large ribosomal subunit protein uL2