HL_9TEZ_026

3D structure

PDB id

9TEZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

DalDroS bound to the Escherichia coli 50S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

2.88 Å

Loop

Sequence

(PSU)GCUAACG

Length

8 nucleotides

Bulged bases

9TEZ|1|V|U|958, 9TEZ|1|V|C|961

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9TEZ_026 not in the Motif Atlas

Homologous match to HL_7A0S_026

Geometric discrepancy: 0.1802

The information below is about HL_7A0S_026

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.5

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

428

Unit IDs

9TEZ|1|V|PSU|955
9TEZ|1|V|G|956
9TEZ|1|V|C|957
9TEZ|1|V|U|958
9TEZ|1|V|A|959
9TEZ|1|V|A|960
9TEZ|1|V|C|961
9TEZ|1|V|G|962

Current chains

Chain V

23S rRNA

Nearby chains

Chain b

5S ribosomal RNA; 5S rRNA

Chain l

Large ribosomal subunit protein uL16