HL_9TEZ_031

3D structure

PDB id

9TEZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

DalDroS bound to the Escherichia coli 50S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

2.88 Å

Loop

Sequence

CGAAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9TEZ_031 not in the Motif Atlas

Homologous match to HL_7A0S_034

Geometric discrepancy: 0.2077

The information below is about HL_7A0S_034

Detailed Annotation

GNRA variation

Broad Annotation

GNRA variation

Motif group

HL_34789.5

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

428

Unit IDs

9TEZ|1|V|C|1363
9TEZ|1|V|G|1364
9TEZ|1|V|A|1365
9TEZ|1|V|A|1366
9TEZ|1|V|A|1367
9TEZ|1|V|G|1368

Current chains

Chain V

23S rRNA

Nearby chains

Chain 1

Large ribosomal subunit protein bL34

Chain w

Large ribosomal subunit protein bL28