HL_9TEZ_066
3D structure
- PDB id
- 9TEZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- DalDroS bound to the Escherichia coli 50S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.88 Å
Loop
- Sequence
- CAGUCGGUAG
- Length
- 10 nucleotides
- Bulged bases
- 9TEZ|1|Z|G|18, 9TEZ|1|Z|G|19, 9TEZ|1|Z|U|20
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9TEZ_066 not in the Motif Atlas
- Homologous match to HL_7MRL_001
- Geometric discrepancy: 0.1046
- The information below is about HL_7MRL_001
- Detailed Annotation
- tRNA D-loop
- Broad Annotation
- No text annotation
- Motif group
- HL_20490.1
- Basepair signature
- cWW-cWS-F
- Number of instances in this motif group
- 13
Unit IDs
9TEZ|1|Z|C|13
9TEZ|1|Z|A|14
9TEZ|1|Z|G|15
9TEZ|1|Z|U|16
9TEZ|1|Z|C|17
9TEZ|1|Z|G|18
9TEZ|1|Z|G|19
9TEZ|1|Z|U|20
9TEZ|1|Z|A|21
9TEZ|1|Z|G|22
Current chains
- Chain Z
- P-site Phe-tRNA
Nearby chains
- Chain V
- Large subunit ribosomal RNA; LSU rRNA
- Chain f
- Large ribosomal subunit protein uL5
Coloring options: