HL_9TI5_007

3D structure

PDB id

9TI5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 70S ribosome with p/E tRNA and RRF oriented towards the SSU (postTC-RRF-SSU)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

AAAAUU

Length

6 nucleotides

Bulged bases

9TI5|1|A|U|232

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9TI5_007 not in the Motif Atlas

Homologous match to HL_7A0S_007

Geometric discrepancy: 0.2978

The information below is about HL_7A0S_007

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_23875.1

Basepair signature

cWW-cSW-F

Number of instances in this motif group

16

Unit IDs

9TI5|1|A|A|228
9TI5|1|A|A|229
9TI5|1|A|A|230
9TI5|1|A|A|231
9TI5|1|A|U|232
9TI5|1|A|U|233

Current chains

Chain A

23S rRNA

Nearby chains

Chain O

50S ribosomal protein L15