HL_9TI5_012
3D structure
- PDB id
- 9TI5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S ribosome with p/E tRNA and RRF oriented towards the SSU (postTC-RRF-SSU)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.2 Å
Loop
- Sequence
- GCACGUGAAAU
- Length
- 11 nucleotides
- Bulged bases
- 9TI5|1|A|G|432
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9TI5_012 not in the Motif Atlas
- Homologous match to HL_7A0S_013
- Geometric discrepancy: 0.4
- The information below is about HL_7A0S_013
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_91503.8
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
9TI5|1|A|G|428
9TI5|1|A|C|429
9TI5|1|A|A|430
9TI5|1|A|C|431
9TI5|1|A|G|432
9TI5|1|A|U|433
9TI5|1|A|G|434
9TI5|1|A|A|435
9TI5|1|A|A|436
9TI5|1|A|A|437
9TI5|1|A|U|438
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 1
- 50S ribosomal protein L28
- Chain D
- Transfer RNA; tRNA
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