HL_9TI5_021
3D structure
- PDB id
- 9TI5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S ribosome with p/E tRNA and RRF oriented towards the SSU (postTC-RRF-SSU)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.2 Å
Loop
- Sequence
- GGUAACAC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9TI5_021 not in the Motif Atlas
- Geometric match to HL_9DFE_020
- Geometric discrepancy: 0.1814
- The information below is about HL_9DFE_020
- Detailed Annotation
- GNRA with tandem sheared
- Broad Annotation
- No text annotation
- Motif group
- HL_98423.5
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 15
Unit IDs
9TI5|1|A|G|757
9TI5|1|A|G|758
9TI5|1|A|U|759
9TI5|1|A|A|760
9TI5|1|A|A|761
9TI5|1|A|C|762
9TI5|1|A|A|763
9TI5|1|A|C|764
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain a
- Small subunit ribosomal RNA; SSU rRNA
- Chain p
- 30S ribosomal protein S15
Coloring options: