HL_9TI5_070
3D structure
- PDB id
- 9TI5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S ribosome with p/E tRNA and RRF oriented towards the SSU (postTC-RRF-SSU)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.2 Å
Loop
- Sequence
- UCAAAAG
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9TI5_070 not in the Motif Atlas
- Homologous match to HL_8JOZ_003
- Geometric discrepancy: 0.4413
- The information below is about HL_8JOZ_003
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_34789.6
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 434
Unit IDs
9TI5|1|D|U|47|||D
9TI5|1|D|C|47|||E
9TI5|1|D|A|47|||F
9TI5|1|D|A|47|||G
9TI5|1|D|A|47|||H
9TI5|1|D|A|47|||I
9TI5|1|D|G|47|||J
Current chains
- Chain D
- tRNA(Ser3)
Nearby chains
- Chain J
- 50S ribosomal protein L5
- Chain a
- Small subunit ribosomal RNA; SSU rRNA
- Chain n
- 30S ribosomal protein S13
Coloring options: