HL_9TI5_078
3D structure
- PDB id
- 9TI5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S ribosome with p/E tRNA and RRF oriented towards the SSU (postTC-RRF-SSU)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.2 Å
Loop
- Sequence
- AACUGAGACACGGU
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9TI5_078 not in the Motif Atlas
- Homologous match to HL_6CZR_079
- Geometric discrepancy: 0.1362
- The information below is about HL_6CZR_079
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_81205.2
- Basepair signature
- cWW-cWW-tWH-F-tWH-F-F-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
9TI5|1|a|A|328
9TI5|1|a|A|329
9TI5|1|a|C|330
9TI5|1|a|U|331
9TI5|1|a|G|332
9TI5|1|a|A|333
9TI5|1|a|G|334
9TI5|1|a|A|335
9TI5|1|a|C|336
9TI5|1|a|A|337
9TI5|1|a|C|338
9TI5|1|a|G|339
9TI5|1|a|G|340
9TI5|1|a|U|341
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain q
- 30S ribosomal protein S16
- Chain u
- 30S ribosomal protein S20
Coloring options: