HL_9TI5_081

3D structure

PDB id

9TI5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 70S ribosome with p/E tRNA and RRF oriented towards the SSU (postTC-RRF-SSU)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

9TI5|1|a|U|429

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9TI5_081 not in the Motif Atlas

Homologous match to HL_6CZR_082

Geometric discrepancy: 0.3177

The information below is about HL_6CZR_082

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_50006.1

Basepair signature

cWW-F-F

Number of instances in this motif group

6

Unit IDs

9TI5|1|a|C|427
9TI5|1|a|U|428
9TI5|1|a|U|429
9TI5|1|a|C|430
9TI5|1|a|G|431
9TI5|1|a|G|432

Current chains

Chain a

16S rRNA

Nearby chains

Chain d

30S ribosomal protein S3

Chain e

30S ribosomal protein S4