HL_9TI5_095

3D structure

PDB id

9TI5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 70S ribosome with p/E tRNA and RRF oriented towards the SSU (postTC-RRF-SSU)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

UGACAAA

Length

7 nucleotides

Bulged bases

9TI5|1|a|C|1178

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9TI5_095 not in the Motif Atlas

Homologous match to HL_6CZR_098

Geometric discrepancy: 0.3486

The information below is about HL_6CZR_098

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.6

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

360

Unit IDs

9TI5|1|a|U|1175
9TI5|1|a|G|1176
9TI5|1|a|A|1177
9TI5|1|a|C|1178
9TI5|1|a|A|1179
9TI5|1|a|A|1180
9TI5|1|a|A|1181

Current chains

Chain a

16S rRNA

Nearby chains

Chain c

30S ribosomal protein S2