HL_9TI6_078
3D structure
- PDB id
- 9TI6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S ribosome with p/E tRNA and RRF oriented towards the LSU (postTC-RRF-LSU)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.62 Å
Loop
- Sequence
- GGUAACGGC
- Length
- 9 nucleotides
- Bulged bases
- 9TI6|1|a|G|274
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9TI6_078 not in the Motif Atlas
- Homologous match to HL_6CZR_077
- Geometric discrepancy: 0.265
- The information below is about HL_6CZR_077
- Detailed Annotation
- GNRA related
- Broad Annotation
- GNRA related
- Motif group
- HL_84299.3
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 9
Unit IDs
9TI6|1|a|G|267
9TI6|1|a|G|268
9TI6|1|a|U|269
9TI6|1|a|A|270
9TI6|1|a|A|271
9TI6|1|a|C|272
9TI6|1|a|G|273
9TI6|1|a|G|274
9TI6|1|a|C|275
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain r
- 30S ribosomal protein S17
- Chain u
- 30S ribosomal protein S20
Coloring options: