HL_9TI6_100
3D structure
- PDB id
- 9TI6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S ribosome with p/E tRNA and RRF oriented towards the LSU (postTC-RRF-LSU)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.62 Å
Loop
- Sequence
- GAUCAGCAUGC
- Length
- 11 nucleotides
- Bulged bases
- 9TI6|1|a|U|1374
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9TI6_100 not in the Motif Atlas
- Homologous match to HL_6CZR_101
- Geometric discrepancy: 0.3391
- The information below is about HL_6CZR_101
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_06226.3
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
9TI6|1|a|G|1366
9TI6|1|a|A|1367
9TI6|1|a|U|1368
9TI6|1|a|C|1369
9TI6|1|a|A|1370
9TI6|1|a|G|1371
9TI6|1|a|C|1372
9TI6|1|a|A|1373
9TI6|1|a|U|1374
9TI6|1|a|G|1375
9TI6|1|a|C|1376
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain j
- 30S ribosomal protein S9
- Chain k
- Small ribosomal subunit protein uS10
- Chain n
- 30S ribosomal protein S13
- Chain o
- 30S ribosomal protein S14 type Z
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