HL_9TI7_048
3D structure
- PDB id
- 9TI7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S ribosome with E-site tRNA and RRF oriented towards the LSU (postTC-RRF-LSU-2)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.76 Å
Loop
- Sequence
- GUGAAGAUGC
- Length
- 10 nucleotides
- Bulged bases
- 9TI7|1|A|A|2057, 9TI7|1|A|A|2058, 9TI7|1|A|G|2059
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9TI7_048 not in the Motif Atlas
- Homologous match to HL_7A0S_049
- Geometric discrepancy: 0.2062
- The information below is about HL_7A0S_049
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_78372.3
- Basepair signature
- cWW-tWH-F-F-F
- Number of instances in this motif group
- 11
Unit IDs
9TI7|1|A|G|2054
9TI7|1|A|U|2055
9TI7|1|A|G|2056
9TI7|1|A|A|2057
9TI7|1|A|A|2058
9TI7|1|A|G|2059
9TI7|1|A|A|2060
9TI7|1|A|U|2061
9TI7|1|A|G|2062
9TI7|1|A|C|2063
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 5
- Large ribosomal subunit protein bL32
- Chain H
- 50S ribosomal protein L3
- Chain U
- 50S ribosomal protein L21
Coloring options: