HL_9TI8_029

3D structure

PDB id

9TI8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 50S ribosome in complex with RRF, EF-G and fusidic acid (50S-RRF-EF-G-FA)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.18 Å

Loop

Sequence

CUUUG

Length

5 nucleotides

Bulged bases

9TI8|1|A|U|1216

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9TI8_029 not in the Motif Atlas

Geometric match to HL_8CRE_195

Geometric discrepancy: 0.3787

The information below is about HL_8CRE_195

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_50006.6

Basepair signature

cWW-F-F

Number of instances in this motif group

4

Unit IDs

9TI8|1|A|C|1214
9TI8|1|A|U|1215
9TI8|1|A|U|1216
9TI8|1|A|U|1217
9TI8|1|A|G|1218

Current chains

Chain A

23S rRNA

Nearby chains