HL_9TI9_034

3D structure

PDB id

9TI9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 70S ribosome in complex with RRF, EF-G and fusidic acid (70S-RRF-EF-G-FA)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.06 Å

Loop

Sequence

GUUGAUAUUC

Length

10 nucleotides

Bulged bases

9TI9|1|A|U|1433, 9TI9|1|A|U|1434

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9TI9_034 not in the Motif Atlas

Homologous match to HL_7A0S_035

Geometric discrepancy: 0.3496

The information below is about HL_7A0S_035

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_77449.3

Basepair signature

cWW-tWH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

9TI9|1|A|G|1426
9TI9|1|A|U|1427
9TI9|1|A|U|1428
9TI9|1|A|G|1429
9TI9|1|A|A|1430
9TI9|1|A|U|1431
9TI9|1|A|A|1432
9TI9|1|A|U|1433
9TI9|1|A|U|1434
9TI9|1|A|C|1435

Current chains

Chain A

23S rRNA

Nearby chains

Chain W

50S ribosomal protein L23