HL_9TI9_077

3D structure

PDB id

9TI9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 70S ribosome in complex with RRF, EF-G and fusidic acid (70S-RRF-EF-G-FA)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.06 Å

Loop

Sequence

GGAAAC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9TI9_077 not in the Motif Atlas

Homologous match to HL_6CZR_074

Geometric discrepancy: 0.3165

The information below is about HL_6CZR_074

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.6

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

360

Unit IDs

9TI9|1|a|G|158
9TI9|1|a|G|159
9TI9|1|a|A|160
9TI9|1|a|A|161
9TI9|1|a|A|162
9TI9|1|a|C|163

Current chains

Chain a

16S rRNA

Nearby chains

Chain S

50S ribosomal protein L19

Chain u

30S ribosomal protein S20